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LOC115882811 anoctamin-5-like [ Sitophilus oryzae (rice weevil) ]

Gene ID: 115882811, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115882811
Gene description
anoctamin-5-like
See related
EnsemblRapid:LOC115882811
Gene type
protein coding
RefSeq status
MODEL
Organism
Sitophilus oryzae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Dryophthorinae; Sitophilus
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Genomic context

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See LOC115882811 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Soryzae_2.0 (GCF_002938485.1) Unplaced Scaffold NW_022146501.1 (6226836..6256455)

NW_022146501.1Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix protein 1 Neighboring gene RNA helicase Mov10l1-like Neighboring gene bifunctional purine biosynthesis protein PURH Neighboring gene zinc finger protein 664-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022146501 Unplaced Scaffold Reference Soryzae_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sitophilus oryzae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Soryzae_2.0 Primary Assembly

Genomic

  1. NW_022146501.1 Reference Soryzae_2.0 Primary Assembly

    Range
    6226836..6256455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030901059.1 → XP_030756919.1  anoctamin-5-like

    UniProtKB/TrEMBL
    A0A6J2Y1X7
    Related
    XP_030756919.1, XM_030901059.1
    Conserved Domains (2) summary
    pfam04547
    Location:213 → 774
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:11 → 210
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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