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LOC115878556 cytokine-inducible SH2-containing protein-like [ Sitophilus oryzae (rice weevil) ]

Gene ID: 115878556, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115878556
Gene description
cytokine-inducible SH2-containing protein-like
See related
EnsemblRapid:LOC115878556
Gene type
protein coding
RefSeq status
MODEL
Organism
Sitophilus oryzae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Dryophthorinae; Sitophilus
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Genomic context

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See LOC115878556 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Soryzae_2.0 (GCF_002938485.1) Unplaced Scaffold NW_022146190.1 (622065..801799)

NW_022146190.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115878600 Neighboring gene uncharacterized LOC115878555 Neighboring gene KRAB-A domain-containing protein 2-like Neighboring gene tetratricopeptide repeat domain 26 Neighboring gene NUBP iron-sulfur cluster assembly factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022146190 Unplaced Scaffold Reference Soryzae_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokine-inducible SH2-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sitophilus oryzae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Soryzae_2.0 Primary Assembly

Genomic

  1. NW_022146190.1 Reference Soryzae_2.0 Primary Assembly

    Range
    622065..801799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030895079.1 → XP_030750939.1  cytokine-inducible SH2-containing protein-like

    UniProtKB/TrEMBL
    A0A6J2XJV2
    Related
    XP_030750939.1, XM_030895079.1
    Conserved Domains (2) summary
    pfam07525
    Location:237 → 279
    SOCS_box; SOCS box
    cl15255
    Location:112 → 199
    SH2; Src homology 2 (SH2) domain

  2. XM_030895078.1 → XP_030750938.1  cytokine-inducible SH2-containing protein-like

    UniProtKB/TrEMBL
    A0A6J2XJV2
    Related
    XP_030750938.1, XM_030895078.1
    Conserved Domains (2) summary
    pfam07525
    Location:237 → 279
    SOCS_box; SOCS box
    cl15255
    Location:112 → 199
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
Heading Accession and Version

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