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PIG-M Phosphatidylinositol glycan anchor biosynthesis class M [ Sitophilus oryzae (rice weevil) ]

Gene ID: 115878096, updated on 16-May-2024

Summary

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Gene symbol
PIG-M
Gene description
Phosphatidylinositol glycan anchor biosynthesis class M
See related
EnsemblRapid:LOC115878096
Gene type
protein coding
RefSeq status
MODEL
Organism
Sitophilus oryzae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Dryophthorinae; Sitophilus
Orthologs
fruit fly all
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Genomic context

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See PIG-M in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Soryzae_2.0 (GCF_002938485.1) Unplaced Scaffold NW_022146171.1 (1050121..1052559)

NW_022146171.1Genomic Context describing neighboring genes Neighboring gene glycogen debranching enzyme Neighboring gene serine/threonine-protein kinase STK11 Neighboring gene Cytosolic thiouridylase subunit 2 Neighboring gene acylamino-acid-releasing enzyme-like Neighboring gene acylamino-acid-releasing enzyme-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022146171 Unplaced Scaffold Reference Soryzae_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sitophilus oryzae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Soryzae_2.0 Primary Assembly

Genomic

  1. NW_022146171.1 Reference Soryzae_2.0 Primary Assembly

    Range
    1050121..1052559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030894459.1 → XP_030750319.1  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A6J2XI02
    Related
    XP_030750319.1, XM_030894459.1
    Conserved Domains (1) summary
    cl21590
    Location:17 → 445
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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