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HEXB hexosaminidase subunit beta [ Globicephala melas (long-finned pilot whale) ]

Gene ID: 115846743, updated on 17-Mar-2024

Summary

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Gene symbol
HEXB
Gene description
hexosaminidase subunit beta
See related
EnsemblRapid:ENSGMEG00000012632
Gene type
protein coding
RefSeq status
MODEL
Organism
Globicephala melas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Globicephala
Orthologs
human mouse all
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Genomic context

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See HEXB in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_10 current mGloMel1.1 (GCF_963455315.1) 3 NC_083316.1 (58435182..58491469)
100 previous assembly ASM654740v1 (GCF_006547405.1) Unplaced Scaffold NW_022134859.1 (17385442..17427682)

Chromosome 3 - NC_083316.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132596998 Neighboring gene ectodermal-neural cortex 1 Neighboring gene GTP dependent ribosome recycling factor mitochondrial 2 Neighboring gene NSA2 ribosome biogenesis factor Neighboring gene family with sequence similarity 169 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963455315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mGloMel1.1 Primary Assembly

Genomic

  1. NC_083316.1 Reference mGloMel1.1 Primary Assembly

    Range
    58435182..58491469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060295896.1 → XP_060151879.1  beta-hexosaminidase subunit beta isoform X6

  2. XM_060295894.1 → XP_060151877.1  beta-hexosaminidase subunit beta isoform X5

  3. XM_060295892.1 → XP_060151875.1  beta-hexosaminidase subunit beta isoform X3

  4. XM_060295891.1 → XP_060151874.1  beta-hexosaminidase subunit beta isoform X1

  5. XM_060295893.1 → XP_060151876.1  beta-hexosaminidase subunit beta isoform X4

  6. XM_060295898.1 → XP_060151881.1  beta-hexosaminidase subunit beta isoform X6

  7. XM_030845852.2 → XP_030701712.1  beta-hexosaminidase subunit beta isoform X2

    Related
    ENSGMEP00000017905.1
    Conserved Domains (2) summary
    cd06562
    Location:184 → 524
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:40 → 162
    Glycohydro_20b2; beta-acetyl hexosaminidase like

  8. XM_060295895.1 → XP_060151878.1  beta-hexosaminidase subunit beta isoform X6

Nucleotide Protein
Heading Accession and Version

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