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LOC115835066 heparan-sulfate 6-O-sulfotransferase 3-like [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 115835066, updated on 9-Nov-2023

Summary

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Gene symbol
LOC115835066
Gene description
heparan-sulfate 6-O-sulfotransferase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
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Genomic context

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See LOC115835066 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 5 NC_044385.1 (121489741..121805044)

Chromosome 5 - NC_044385.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C3 Neighboring gene UDP-glucose:glycoprotein glucosyltransferase 2 Neighboring gene non-histone chromosomal protein HMG-14 pseudogene Neighboring gene serine/threonine-protein kinase N2-like Neighboring gene uncharacterized LOC115835203 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC115835204 Neighboring gene uncharacterized LOC115835202

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044385.1 Chromosome 5 Reference Asia_NLE_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044385.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    121489741..121805044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030812461.1 → XP_030668321.1  heparan-sulfate 6-O-sulfotransferase 3-like

    Conserved Domains (1) summary
    cl22970
    Location:64 → 145
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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