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L1CAM L1 cell adhesion molecule [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 115833207, updated on 17-Mar-2024

Summary

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Gene symbol
L1CAM
Gene description
L1 cell adhesion molecule
See related
EnsemblRapid:ENSNLEG00000013647
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See L1CAM in Genome Data Viewer
Location:
chromosome: X
Exon count:
29
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) X NC_044406.1 (138887890..138912940, complement)

Chromosome X - NC_044406.1Genomic Context describing neighboring genes Neighboring gene PDZ domain containing 4 Neighboring gene cytochrome c-like Neighboring gene putative lung carcinoma-associated protein 10 Neighboring gene uncharacterized LOC115833208 Neighboring gene Rho GTPase activating protein 4 Neighboring gene arginine vasopressin receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044406.1 Chromosome X Reference Asia_NLE_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neural cell adhesion molecule L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044406.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    138887890..138912940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030806434.1 → XP_030662294.1  neural cell adhesion molecule L1

    UniProtKB/TrEMBL
    G1RTH9
    Related
    ENSNLEP00000049371.1, ENSNLET00000078079.1
    Conserved Domains (8) summary
    cd05867
    Location:347 → 422
    Ig4_L1-CAM_like; Fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05876
    Location:260 → 330
    Ig3_L1-CAM; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    smart00410
    Location:434 → 514
    IG_like; Immunoglobulin like
    cd00063
    Location:612 → 709
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:825 → 905
    fn3; Fibronectin type III domain
    pfam13882
    Location:1144 → 1229
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:134 → 228
    Ig; Immunoglobulin domain
    cl21522
    Location:1021 → 1109
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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