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gnl3l G protein nucleolar 3 like [ Chanos chanos (milkfish) ]

Gene ID: 115814089, updated on 17-Mar-2024

Summary

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Gene symbol
gnl3l
Gene description
G protein nucleolar 3 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Chanos chanos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gonorynchiformes; Chanidae; Chanos
Orthologs
human zebrafish all
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Genomic context

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See gnl3l in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fChaCha1.1 (GCF_902362185.1) 6 NC_044500.1 (35365656..35370759)

Chromosome 6 - NC_044500.1Genomic Context describing neighboring genes Neighboring gene red-sensitive opsin Neighboring gene red-sensitive opsin-like Neighboring gene transcription factor binding to IGHM enhancer 3b Neighboring gene CXXC finger protein 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044500.1 Chromosome 6 Reference fChaCha1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein-like 3-like protein
Names
guanine nucleotide binding protein-like 3 (nucleolar)-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chanos chanos Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fChaCha1.1 Primary Assembly

Genomic

  1. NC_044500.1 Reference fChaCha1.1 Primary Assembly

    Range
    35365656..35370759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030776811.1 → XP_030632671.1  guanine nucleotide-binding protein-like 3-like protein

    UniProtKB/TrEMBL
    A0A6J2VNA8
    Conserved Domains (3) summary
    TIGR03319
    Location:42 → 138
    RNase_Y; ribonuclease Y
    cd04178
    Location:129 → 300
    Nucleostemin_like; A circularly permuted subfamily of the Ras GTPases
    pfam08701
    Location:5 → 71
    GN3L_Grn1; GNL3L/Grn1 putative GTPase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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