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LOC115707857 mitochondrial arginine transporter BAC2 [ Cannabis sativa ]

Gene ID: 115707857, updated on 29-Aug-2024

Summary

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Gene symbol
LOC115707857
Gene description
mitochondrial arginine transporter BAC2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cannabis sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Genomic context

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See LOC115707857 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_11 current ASM2916894v1 (GCF_029168945.1) 1 NC_083601.1 (45697778..45700145, complement)
100.20200513 previous assembly cs10 (GCF_900626175.2) 1 NC_044371.1 (98681598..98684004, complement)

Chromosome 1 - NC_083601.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIN-13B Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2 Neighboring gene uncharacterized LOC115707860 Neighboring gene uncharacterized LOC133038925 Neighboring gene uncharacterized LOC115707861

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome and transcriptome of Cannabis sativa. van Bakel H, et al. Genome Biol, 2011 Oct 20. PMID 22014239, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029168945.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2916894v1 Primary Assembly

Genomic

  1. NC_083601.1 Reference ASM2916894v1 Primary Assembly

    Range
    45697778..45700145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030635944.2 → XP_030491804.2  mitochondrial arginine transporter BAC2

Nucleotide Protein
Heading Accession and Version

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