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LOC115699113 probable galacturonosyltransferase 15 [ Cannabis sativa ]

Gene ID: 115699113, updated on 29-Aug-2024

Summary

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Gene symbol
LOC115699113
Gene description
probable galacturonosyltransferase 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Cannabis sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Genomic context

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See LOC115699113 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_11 current ASM2916894v1 (GCF_029168945.1) 8 NC_083608.1 (47913573..47918727)
100.20200513 previous assembly cs10 (GCF_900626175.2) 8 NC_044379.1 (59688098..59693085)

Chromosome 8 - NC_083608.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115698608 Neighboring gene trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Neighboring gene agamous-like MADS-box protein MADS1 Neighboring gene uncharacterized LOC115697861 Neighboring gene uncharacterized LOC133030344

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome and transcriptome of Cannabis sativa. van Bakel H, et al. Genome Biol, 2011 Oct 20. PMID 22014239, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029168945.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2916894v1 Primary Assembly

Genomic

  1. NC_083608.1 Reference ASM2916894v1 Primary Assembly

    Range
    47913573..47918727
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030626353.2 → XP_030482213.2  probable galacturonosyltransferase 15 isoform X1

  2. XM_061102155.1 → XP_060958138.1  probable galacturonosyltransferase 15 isoform X2

  3. XM_061102154.1 → XP_060958137.1  probable galacturonosyltransferase 15 isoform X1

Nucleotide Protein
Heading Accession and Version

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