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LOC115697557 carboxyl-terminal-processing peptidase 1, chloroplastic [ Cannabis sativa ]

Gene ID: 115697557, updated on 29-Aug-2024

Summary

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Gene symbol
LOC115697557
Gene description
carboxyl-terminal-processing peptidase 1, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Cannabis sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Genomic context

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See LOC115697557 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_11 current ASM2916894v1 (GCF_029168945.1) 7 NC_083607.1 (60986673..60991926)
100.20200513 previous assembly cs10 (GCF_900626175.2) 7 NC_044378.1 (68541820..68547186)

Chromosome 7 - NC_083607.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115697573 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC115697538 Neighboring gene transfer RNA glycine (anticodon GCC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome and transcriptome of Cannabis sativa. van Bakel H, et al. Genome Biol, 2011 Oct 20. PMID 22014239, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029168945.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2916894v1 Primary Assembly

Genomic

  1. NC_083607.1 Reference ASM2916894v1 Primary Assembly

    Range
    60986673..60991926
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030624624.2 → XP_030480484.1  carboxyl-terminal-processing peptidase 1, chloroplastic

    UniProtKB/TrEMBL
    A0A7J6EG11
    Conserved Domains (1) summary
    PLN00049
    Location:95 → 439
    PLN00049; carboxyl-terminal processing protease; Provisional
Nucleotide Protein
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