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HABP4 hyaluronan binding protein 4 [ Strigops habroptila (Kakapo) ]

Gene ID: 115619672, updated on 3-Aug-2024

Summary

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Gene symbol
HABP4
Gene description
hyaluronan binding protein 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See HABP4 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
8
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) Z NC_044302.2 (58286021..58313749, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) Z NC_044302.1 (58286021..58313749, complement)

Chromosome Z - NC_044302.2Genomic Context describing neighboring genes Neighboring gene peroxiredoxin like 2C Neighboring gene cell division cycle 14B Neighboring gene uncharacterized LOC115600947 Neighboring gene zinc finger protein 367

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intracellular hyaluronan-binding protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044302.2 Reference bStrHab1.2.pri

    Range
    58286021..58313749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030512342.1 → XP_030368202.1  intracellular hyaluronan-binding protein 4

    UniProtKB/TrEMBL
    A0A672V9Z0
    Conserved Domains (2) summary
    pfam04774
    Location:186 → 290
    HABP4_PAI-RBP1; Hyaluronan / mRNA binding family
    pfam16174
    Location:14 → 139
    IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal
Nucleotide Protein
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