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HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115619668, updated on 17-Mar-2024

Summary

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Gene symbol
HMGCS1
Gene description
3-hydroxy-3-methylglutaryl-CoA synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See HMGCS1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
12
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) Z NC_044302.2 (86247957..86263976)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) Z NC_044302.1 (86247957..86263976)

Chromosome Z - NC_044302.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 267 Neighboring gene C-C motif chemokine ligand 28 Neighboring gene NIM1 serine/threonine protein kinase Neighboring gene zinc finger protein 131 Neighboring gene uncharacterized LOC115619365

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in farnesyl diphosphate biosynthetic process, mevalonate pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxymethylglutaryl-CoA synthase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044302.2 Reference bStrHab1.2.pri

    Range
    86247957..86263976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030512331.1 → XP_030368191.1  hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A672TTG8
    Conserved Domains (1) summary
    TIGR01833
    Location:13 → 470
    HMG-CoA-S_euk; 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

  2. XM_030512330.2 → XP_030368190.1  hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1

    Conserved Domains (1) summary
    TIGR01833
    Location:30 → 487
    HMG-CoA-S_euk; 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

  3. XM_030512328.2 → XP_030368188.1  hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1

    Conserved Domains (1) summary
    TIGR01833
    Location:30 → 487
    HMG-CoA-S_euk; 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade
Nucleotide Protein
Heading Accession and Version

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