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SACM1L SAC1 like phosphatidylinositide phosphatase [ Strigops habroptila (Kakapo) ]

Gene ID: 115619537, updated on 3-Aug-2024

Summary

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Gene symbol
SACM1L
Gene description
SAC1 like phosphatidylinositide phosphatase
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See SACM1L in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 1 NC_044277.2 (144322687..144354424)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 1 NC_044277.1 (160793882..160825619)

Chromosome 1 - NC_044277.2Genomic Context describing neighboring genes Neighboring gene LIM domain containing 1 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene small nuclear ribonucleoprotein D1 polypeptide Neighboring gene solute carrier family 6 member 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositide phosphatase SAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044277.2 Reference bStrHab1.2.pri

    Range
    144322687..144354424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030511969.1 → XP_030367829.1  phosphatidylinositide phosphatase SAC1 isoform X1

    UniProtKB/TrEMBL
    A0A672TSH7
    Conserved Domains (1) summary
    COG5329
    Location:63 → 525
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]

  2. XM_030511980.1 → XP_030367840.1  phosphatidylinositide phosphatase SAC1 isoform X2

    Conserved Domains (1) summary
    COG5329
    Location:16 → 416
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Nucleotide Protein
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