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LMAN2L lectin, mannose binding 2 like [ Strigops habroptila (Kakapo) ]

Gene ID: 115618461, updated on 3-Aug-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 21
Exon count:
10
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 21 NC_044297.2 (535922..544507)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 20 NC_044296.1 (535922..544507)

Chromosome 21 - NC_044297.2Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 39 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044297.2 Reference bStrHab1.2.pri

    Range
    535922..544507
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030510038.1 → XP_030365898.1  VIP36-like protein isoform X2

    Conserved Domains (1) summary
    cd06901
    Location:31 → 279
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  2. XM_030510037.1 → XP_030365897.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A672TJT4
    Conserved Domains (1) summary
    cd06901
    Location:31 → 290
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  3. XM_030510040.1 → XP_030365900.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:1 → 199
    lectin_L-type; legume lectins

RNA

  1. XR_003994805.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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