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POMT1 protein O-mannosyltransferase 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115616997, updated on 3-Aug-2024

Summary

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Gene symbol
POMT1
Gene description
protein O-mannosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See POMT1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
21
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 15 NC_044291.2 (4957990..4971704, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 16 NC_044292.1 (4957990..4971704, complement)

Chromosome 15 - NC_044291.2Genomic Context describing neighboring genes Neighboring gene Rap guanine nucleotide exchange factor 1 Neighboring gene proline rich transmembrane protein 1B Neighboring gene uridine-cytidine kinase 1 Neighboring gene proline rich coiled-coil 2B Neighboring gene uncharacterized LOC115617004

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044291.2 Reference bStrHab1.2.pri

    Range
    4957990..4971704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030506967.1 → XP_030362827.1  protein O-mannosyl-transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A672UXB7
    Conserved Domains (1) summary
    COG1928
    Location:19 → 720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

  2. XM_030506966.1 → XP_030362826.1  protein O-mannosyl-transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A672UYB5
    Conserved Domains (1) summary
    COG1928
    Location:29 → 730
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

  3. XM_030506968.1 → XP_030362828.1  protein O-mannosyl-transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A672UXB7
    Conserved Domains (1) summary
    COG1928
    Location:19 → 720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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