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HEXD hexosaminidase D [ Strigops habroptila (Kakapo) ]

Gene ID: 115616849, updated on 3-Aug-2024

Summary

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Gene symbol
HEXD
Gene description
hexosaminidase D
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See HEXD in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 14 NC_044290.2 (4179443..4190228)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 15 NC_044291.1 (4179443..4190228)

Chromosome 14 - NC_044290.2Genomic Context describing neighboring genes Neighboring gene urotensin 2 receptor Neighboring gene urotensin-2 receptor-like Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene nuclear prelamin A recognition factor Neighboring gene transfer RNA glutamine (anticodon UUG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosaminidase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044290.2 Reference bStrHab1.2.pri

    Range
    4179443..4190228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030506621.1 → XP_030362481.1  hexosaminidase D

    UniProtKB/TrEMBL
    A0A672UHE4
    Conserved Domains (1) summary
    cd06565
    Location:3 → 316
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...
Nucleotide Protein
Heading Accession and Version

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