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FUCA1 alpha-L-fucosidase 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115616142, updated on 3-Aug-2024

Summary

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Gene symbol
FUCA1
Gene description
alpha-L-fucosidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See FUCA1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 12 NC_044288.2 (1932468..1937245, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 13 NC_044289.1 (1932468..1937245, complement)

Chromosome 12 - NC_044288.2Genomic Context describing neighboring genes Neighboring gene UDP-galactose-4-epimerase Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene lysine demethylase 1A Neighboring gene transmembrane protein 54

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tissue alpha-L-fucosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044288.2 Reference bStrHab1.2.pri

    Range
    1932468..1937245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030505043.1 → XP_030360903.1  tissue alpha-L-fucosidase

    UniProtKB/TrEMBL
    A0A672V6V4
    Conserved Domains (2) summary
    smart00812
    Location:20 → 402
    Alpha_L_fucos; Alpha-L-fucosidase
    pfam16757
    Location:367 → 449
    Fucosidase_C; Alpha-L-fucosidase C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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