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POFUT1 protein O-fucosyltransferase 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115615203, updated on 3-Aug-2024

Summary

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Gene symbol
POFUT1
Gene description
protein O-fucosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See POFUT1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 13 NC_044289.2 (15599597..15604242)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 12 NC_044288.1 (15599597..15604242)

Chromosome 13 - NC_044289.2Genomic Context describing neighboring genes Neighboring gene transmembrane 9 superfamily member 4 Neighboring gene PLAG1 like zinc finger 2 Neighboring gene kinesin family member 3B Neighboring gene ASXL transcriptional regulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044289.2 Reference bStrHab1.2.pri

    Range
    15599597..15604242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030503111.1 → XP_030358971.1  GDP-fucose protein O-fucosyltransferase 1

    UniProtKB/TrEMBL
    A0A672UMK2
    Conserved Domains (1) summary
    cd11302
    Location:26 → 375
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
Nucleotide Protein
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