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CTSA cathepsin A [ Strigops habroptila (Kakapo) ]

Gene ID: 115615005, updated on 3-Aug-2024

Summary

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Gene symbol
CTSA
Gene description
cathepsin A
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See CTSA in Genome Data Viewer
Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 13 NC_044289.2 (16046540..16052844)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 12 NC_044288.1 (16046540..16052844)

Chromosome 13 - NC_044289.2Genomic Context describing neighboring genes Neighboring gene sorting nexin family member 21 Neighboring gene acyl-CoA thioesterase 8 Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene phospholipid transfer protein Neighboring gene phosphorylated CTD interacting factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal protective protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044289.2 Reference bStrHab1.2.pri

    Range
    16046540..16052844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030502591.1 → XP_030358451.1  lysosomal protective protein isoform X2

    UniProtKB/TrEMBL
    A0A672TZ80
    Conserved Domains (1) summary
    pfam00450
    Location:29 → 468
    Peptidase_S10; Serine carboxypeptidase

  2. XM_030502592.1 → XP_030358452.1  lysosomal protective protein isoform X2

    UniProtKB/TrEMBL
    A0A672TZ80
    Conserved Domains (1) summary
    pfam00450
    Location:29 → 468
    Peptidase_S10; Serine carboxypeptidase

  3. XM_030502590.2 → XP_030358450.1  lysosomal protective protein isoform X1

    UniProtKB/TrEMBL
    A0A672TZ80
    Conserved Domains (1) summary
    pfam00450
    Location:46 → 485
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version

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