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TKT transketolase [ Strigops habroptila (Kakapo) ]

Gene ID: 115614715, updated on 3-Aug-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 11 NC_046360.1 (23838237..23862413, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 11 NC_044287.1 (23838237..23862413, complement)

Chromosome 11 - NC_046360.1Genomic Context describing neighboring genes Neighboring gene FA complementation group D2 Neighboring gene transmembrane protein 40 Neighboring gene BRICK1 subunit of SCAR/WAVE actin nucleating complex Neighboring gene decapping mRNA 1A Neighboring gene calcium voltage-gated channel subunit alpha1 D Neighboring gene choline dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_046360.1 Reference bStrHab1.2.pri

    Range
    23838237..23862413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030501953.1 → XP_030357813.1  transketolase

    UniProtKB/TrEMBL
    A0A672U781, A0A672U793
    Conserved Domains (1) summary
    PRK05899
    Location:8 → 617
    PRK05899; transketolase; Reviewed
Nucleotide Protein
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