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TRNT1 tRNA nucleotidyl transferase 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115614261, updated on 3-Aug-2024

Summary

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Gene symbol
TRNT1
Gene description
tRNA nucleotidyl transferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See TRNT1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 11 NC_046360.1 (28114501..28121465, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 11 NC_044287.1 (28114501..28121465, complement)

Chromosome 11 - NC_046360.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115614427 Neighboring gene cereblon Neighboring gene interleukin 5 receptor subunit alpha Neighboring gene contactin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCA tRNA nucleotidyltransferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_046360.1 Reference bStrHab1.2.pri

    Range
    28114501..28121465 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030500852.1 → XP_030356712.1  CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X1

    Conserved Domains (1) summary
    COG0617
    Location:40 → 433
    PcnB; tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]

  2. XM_030500854.1 → XP_030356714.1  CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A672VDI3
    Conserved Domains (1) summary
    COG0617
    Location:11 → 404
    PcnB; tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]

  3. XM_030500855.2 → XP_030356715.1  CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A672VDI3
    Conserved Domains (1) summary
    COG0617
    Location:11 → 404
    PcnB; tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]

  4. XM_030500853.1 → XP_030356713.1  CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X1

    Conserved Domains (1) summary
    COG0617
    Location:40 → 433
    PcnB; tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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