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LCLAT1 lysocardiolipin acyltransferase 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115613526, updated on 3-Aug-2024

Summary

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Gene symbol
LCLAT1
Gene description
lysocardiolipin acyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See LCLAT1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 10 NC_046359.1 (34201055..34322258)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 10 NC_044286.1 (34201055..34322258)

Chromosome 10 - NC_046359.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115613759 Neighboring gene LBH regulator of WNT signaling pathway Neighboring gene calpain-13-like Neighboring gene polypeptide N-acetylgalactosaminyltransferase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysocardiolipin acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_046359.1 Reference bStrHab1.2.pri

    Range
    34201055..34322258
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030499058.1 → XP_030354918.1  lysocardiolipin acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A672UI33
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:233 → 303
    Acyltransf_C; Acyltransferase C-terminus

  2. XM_030499059.1 → XP_030354919.1  lysocardiolipin acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A672UI33
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:233 → 303
    Acyltransf_C; Acyltransferase C-terminus

  3. XM_030499063.1 → XP_030354923.1  lysocardiolipin acyltransferase 1 isoform X3

    Conserved Domains (2) summary
    cd07990
    Location:53 → 179
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:164 → 234
    Acyltransf_C; Acyltransferase C-terminus

  4. XM_030499061.1 → XP_030354921.1  lysocardiolipin acyltransferase 1 isoform X2

    Conserved Domains (2) summary
    cd07990
    Location:55 → 199
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:184 → 254
    Acyltransf_C; Acyltransferase C-terminus

  5. XM_030499062.1 → XP_030354922.1  lysocardiolipin acyltransferase 1 isoform X3

    Conserved Domains (2) summary
    cd07990
    Location:53 → 179
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:164 → 234
    Acyltransf_C; Acyltransferase C-terminus

  6. XM_030499065.1 → XP_030354925.1  lysocardiolipin acyltransferase 1 isoform X3

    Conserved Domains (2) summary
    cd07990
    Location:53 → 179
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:164 → 234
    Acyltransf_C; Acyltransferase C-terminus

  7. XM_030499060.1 → XP_030354920.1  lysocardiolipin acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A672UI33
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:233 → 303
    Acyltransf_C; Acyltransferase C-terminus

  8. XM_030499066.1 → XP_030354926.1  lysocardiolipin acyltransferase 1 isoform X4

    Conserved Domains (2) summary
    cd07990
    Location:36 → 162
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:147 → 217
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
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