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ALDH1A3 aldehyde dehydrogenase 1 family member A3 [ Strigops habroptila (Kakapo) ]

Gene ID: 115613124, updated on 3-Aug-2024

Summary

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Gene symbol
ALDH1A3
Gene description
aldehyde dehydrogenase 1 family member A3
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See ALDH1A3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 9 NC_044285.2 (3416582..3449345, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 9 NC_044285.1 (3416582..3449345, complement)

Chromosome 9 - NC_044285.2Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate synthase 1 Neighboring gene leucine rich repeat kinase 1 Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene lines homolog 1 Neighboring gene ceramide synthase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular aldehyde metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldehyde dehydrogenase family 1 member A3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044285.2 Reference bStrHab1.2.pri

    Range
    3416582..3449345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030498226.1 → XP_030354086.1  aldehyde dehydrogenase family 1 member A3 isoform X1

    UniProtKB/TrEMBL
    A0A672V0E0, A0A672V2I4
    Conserved Domains (1) summary
    cd07141
    Location:27 → 506
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

  2. XM_030498227.1 → XP_030354087.1  aldehyde dehydrogenase family 1 member A3 isoform X2

    UniProtKB/TrEMBL
    A0A672V0E0
    Conserved Domains (1) summary
    cl11961
    Location:27 → 468
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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