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ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [ Strigops habroptila (Kakapo) ]

Gene ID: 115611325, updated on 3-Aug-2024

Summary

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Gene symbol
ST6GALNAC5
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See ST6GALNAC5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 8 NC_044284.2 (50371731..50445801, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 8 NC_044284.1 (50371731..50445801, complement)

Chromosome 8 - NC_044284.2Genomic Context describing neighboring genes Neighboring gene zinc finger ZZ-type containing 3 Neighboring gene adenylate kinase 5 Neighboring gene uncharacterized LOC115611270 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene cilia and flagella associated protein 144 Neighboring gene PIF1 5'-to-3' DNA helicase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044284.2 Reference bStrHab1.2.pri

    Range
    50371731..50445801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030494060.1 → XP_030349920.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    A0A672URU9
    Conserved Domains (1) summary
    pfam00777
    Location:87 → 315
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_030494061.2 → XP_030349921.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 isoform X2

    UniProtKB/TrEMBL
    A0A672UN84
    Conserved Domains (1) summary
    pfam00777
    Location:53 → 281
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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