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SCP2 sterol carrier protein 2 [ Strigops habroptila (Kakapo) ]

Gene ID: 115611161, updated on 3-Aug-2024

Summary

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Gene symbol
SCP2
Gene description
sterol carrier protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See SCP2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 8 NC_044284.2 (56742077..56762786)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 8 NC_044284.1 (57008306..57029015)

Chromosome 8 - NC_044284.2Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 7 Neighboring gene protein zyg-11 homolog B Neighboring gene enoyl-CoA hydratase domain containing 2 Neighboring gene podocan Neighboring gene solute carrier family 1 member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-specific lipid-transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044284.2 Reference bStrHab1.2.pri

    Range
    56742077..56762786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030493611.1 → XP_030349471.1  non-specific lipid-transfer protein

    UniProtKB/TrEMBL
    A0A672UAM2
    Conserved Domains (2) summary
    PRK08256
    Location:3 → 393
    PRK08256; lipid-transfer protein; Provisional
    pfam02036
    Location:423 → 524
    SCP2; SCP-2 sterol transfer family
Nucleotide Protein
Heading Accession and Version

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