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DSE dermatan sulfate epimerase [ Strigops habroptila (Kakapo) ]

Gene ID: 115609458, updated on 3-Aug-2024

Summary

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Gene symbol
DSE
Gene description
dermatan sulfate epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See DSE in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 6 NC_044282.2 (11894174..11928288, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 6 NC_044282.1 (11894174..11928288, complement)

Chromosome 6 - NC_044282.2Genomic Context describing neighboring genes Neighboring gene calcium homeostasis modulator protein 5-like Neighboring gene trafficking protein particle complex subunit 3L Neighboring gene calcium homeostasis modulator protein 6-like Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene collagen type X alpha 1 chain Neighboring gene fyn related Src family tyrosine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044282.2 Reference bStrHab1.2.pri

    Range
    11894174..11928288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030489737.1 → XP_030345597.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A672TTJ2

  2. XM_030489735.1 → XP_030345595.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A672TTJ2

  3. XM_030489738.1 → XP_030345598.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A672TTJ2

  4. XM_030489739.1 → XP_030345599.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A672TTJ2

  5. XM_030489736.1 → XP_030345596.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A672TTJ2

  6. XM_030489740.1 → XP_030345600.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A672TTJ2

  7. XM_030489741.1 → XP_030345601.1  dermatan-sulfate epimerase isoform X2

  8. XM_032920009.1 → XP_032775900.1  dermatan-sulfate epimerase isoform X4

  9. XM_030489743.1 → XP_030345603.1  dermatan-sulfate epimerase isoform X3

Nucleotide Protein
Heading Accession and Version

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