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CERS6 ceramide synthase 6 [ Strigops habroptila (Kakapo) ]

Gene ID: 115608675, updated on 3-Aug-2024

Summary

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Gene symbol
CERS6
Gene description
ceramide synthase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See CERS6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 5 NC_044281.2 (20961741..21083650, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 5 NC_044281.1 (20961741..21083650, complement)

Chromosome 5 - NC_044281.2Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily B member 11 Neighboring gene glucose-6-phosphatase catalytic subunit 2 Neighboring gene SPC25 component of NDC80 kinetochore complex Neighboring gene uncharacterized LOC115608197 Neighboring gene serine/threonine kinase 39 Neighboring gene beta-1,3-galactosyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044281.2 Reference bStrHab1.2.pri

    Range
    20961741..21083650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030487850.1 → XP_030343710.1  ceramide synthase 6 isoform X2

    Conserved Domains (2) summary
    cd00086
    Location:80 → 127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain

  2. XM_030487849.1 → XP_030343709.1  ceramide synthase 6 isoform X1

    UniProtKB/TrEMBL
    A0A672TLJ8
    Conserved Domains (2) summary
    cd00086
    Location:80 → 127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein
Heading Accession and Version

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