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ACADSB acyl-CoA dehydrogenase short/branched chain [ Strigops habroptila (Kakapo) ]

Gene ID: 115608435, updated on 3-Aug-2024

Summary

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Gene symbol
ACADSB
Gene description
acyl-CoA dehydrogenase short/branched chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See ACADSB in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 5 NC_044281.2 (78340574..78364084)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 5 NC_044281.1 (78247137..78270647)

Chromosome 5 - NC_044281.2Genomic Context describing neighboring genes Neighboring gene phosphoseryl-tRNA kinase Neighboring gene IKAROS family zinc finger 5 Neighboring gene H6 family homeobox 3 Neighboring gene H6 family homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044281.2 Reference bStrHab1.2.pri

    Range
    78340574..78364084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030487242.1 → XP_030343102.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A672TRW9
    Conserved Domains (1) summary
    cd01158
    Location:63 → 434
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases

  2. XM_030487243.1 → XP_030343103.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A672TRW9
    Conserved Domains (1) summary
    cd01158
    Location:41 → 412
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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