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CHST9 carbohydrate sulfotransferase 9 [ Strigops habroptila (Kakapo) ]

Gene ID: 115608078, updated on 3-Aug-2024

Summary

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Gene symbol
CHST9
Gene description
carbohydrate sulfotransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 1 NC_044277.2 (46360664..46447132)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 1 NC_044277.1 (46387476..46473944)

Chromosome 1 - NC_044277.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115617075 Neighboring gene cadherin 2 Neighboring gene uncharacterized LOC115614492 Neighboring gene aquaporin 4 Neighboring gene potassium channel tetramerization domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044277.2 Reference bStrHab1.2.pri

    Range
    46360664..46447132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030486268.1 → XP_030342128.1  carbohydrate sulfotransferase 9 isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:174 → 403
    Sulfotransfer_2; Sulfotransferase family

  2. XM_030486258.1 → XP_030342118.1  carbohydrate sulfotransferase 9 isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:174 → 403
    Sulfotransfer_2; Sulfotransferase family

  3. XM_030486277.1 → XP_030342137.1  carbohydrate sulfotransferase 9 isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:174 → 403
    Sulfotransfer_2; Sulfotransferase family

  4. XM_030486287.1 → XP_030342147.1  carbohydrate sulfotransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A672TVV9
    Conserved Domains (1) summary
    pfam03567
    Location:120 → 349
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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