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ALG12 ALG12 alpha-1,6-mannosyltransferase [ Strigops habroptila (Kakapo) ]

Gene ID: 115605843, updated on 3-Aug-2024

Summary

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Gene symbol
ALG12
Gene description
ALG12 alpha-1,6-mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See ALG12 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 3 NC_044279.2 (19635235..19651590, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 3 NC_044279.1 (18703620..18719975, complement)

Chromosome 3 - NC_044279.2Genomic Context describing neighboring genes Neighboring gene bromodomain containing 1 Neighboring gene zinc finger BED-type containing 4 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene Pim-3 proto-oncogene, serine/threonine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044279.2 Reference bStrHab1.2.pri

    Range
    19635235..19651590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030480884.1 → XP_030336744.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A672UVK6
    Conserved Domains (1) summary
    cl21590
    Location:16 → 356
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_030480888.1 → XP_030336748.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:16 → 296
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_030480886.1 → XP_030336746.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A672UVK6
    Conserved Domains (1) summary
    cl21590
    Location:16 → 356
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_030480887.1 → XP_030336747.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A672UVK6
    Conserved Domains (1) summary
    cl21590
    Location:16 → 356
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_030480885.1 → XP_030336745.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A672UVK6
    Conserved Domains (1) summary
    cl21590
    Location:16 → 356
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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