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PLCZ1 phospholipase C zeta 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115605170, updated on 3-Aug-2024

Summary

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Gene symbol
PLCZ1
Gene description
phospholipase C zeta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See PLCZ1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 3 NC_044279.2 (62217705..62270420)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 3 NC_044279.1 (61286090..61338805)

Chromosome 3 - NC_044279.2Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A5 Neighboring gene capping actin protein of muscle Z-line subunit alpha 3 Neighboring gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma Neighboring gene RERG like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration involved in egg activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044279.2 Reference bStrHab1.2.pri

    Range
    62217705..62270420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030479184.1 → XP_030335044.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1

    UniProtKB/TrEMBL
    A0A672TPE8
    Conserved Domains (2) summary
    PLN02222
    Location:62 → 635
    PLN02222; phosphoinositide phospholipase C 2
    cl14615
    Location:156 → 481
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Nucleotide Protein
Heading Accession and Version

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