U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TMTC1 transmembrane O-mannosyltransferase targeting cadherins 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115604823, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
TMTC1
Gene description
transmembrane O-mannosyltransferase targeting cadherins 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TMTC1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 3 NC_044279.2 (66761855..66908254, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 3 NC_044279.1 (65830240..65976639, complement)

Chromosome 3 - NC_044279.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein OZF-like Neighboring gene acrosin-binding protein-like Neighboring gene DEAD/H-box helicase 11 Neighboring gene uncharacterized LOC115604825 Neighboring gene importin 8

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein O-mannosyl-transferase TMTC1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044279.2 Reference bStrHab1.2.pri

    Range
    66761855..66908254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030478263.1 → XP_030334123.1  protein O-mannosyl-transferase TMTC1 isoform X2

    UniProtKB/TrEMBL
    A0A672TFB1
    Conserved Domains (3) summary
    TIGR02917
    Location:422 → 828
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:436 → 464
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:245 → 318
    DUF1736; Domain of unknown function (DUF1736)

  2. XM_030478262.1 → XP_030334122.1  protein O-mannosyl-transferase TMTC1 isoform X1

    UniProtKB/TrEMBL
    A0A672TFB1
    Conserved Domains (3) summary
    TIGR02917
    Location:534 → 947
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:548 → 576
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:357 → 430
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.