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CHPT1 choline phosphotransferase 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115604749, updated on 3-Aug-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See CHPT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 3 NC_044279.2 (71173943..71195710)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 3 NC_044279.1 (70242328..70264095)

Chromosome 3 - NC_044279.2Genomic Context describing neighboring genes Neighboring gene Spi-C transcription factor Neighboring gene myosin binding protein C1 Neighboring gene synaptonemal complex protein 3 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene DNA damage regulated autophagy modulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044279.2 Reference bStrHab1.2.pri

    Range
    71173943..71195710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030478129.1 → XP_030333989.1  cholinephosphotransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A672UQI8
    Conserved Domains (1) summary
    cl00453
    Location:11 → 325
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  2. XM_030478131.1 → XP_030333991.1  cholinephosphotransferase 1 isoform X5

    UniProtKB/TrEMBL
    A0A672UN34
    Conserved Domains (1) summary
    cl00453
    Location:11 → 251
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  3. XM_030478127.1 → XP_030333987.1  cholinephosphotransferase 1 isoform X2

    Conserved Domains (1) summary
    cl00453
    Location:11 → 325
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  4. XM_030478126.1 → XP_030333986.1  cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A672UQJ1
    Conserved Domains (1) summary
    cl00453
    Location:11 → 325
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  5. XM_030478130.1 → XP_030333990.1  cholinephosphotransferase 1 isoform X4

    Conserved Domains (1) summary
    cl00453
    Location:18 → 171
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

RNA

  1. XR_003990399.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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