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PNPLA4 patatin like phospholipase domain containing 4 [ Strigops habroptila (Kakapo) ]

Gene ID: 115604045, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA4
Gene description
patatin like phospholipase domain containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human all
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Genomic context

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See PNPLA4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 2 NC_044278.2 (50604417..50623492)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 2 NC_044278.1 (31723096..31742171)

Chromosome 2 - NC_044278.2Genomic Context describing neighboring genes Neighboring gene anosmin 1 Neighboring gene uncharacterized LOC115604044 Neighboring gene uncharacterized LOC115604046 Neighboring gene steroid sulfatase Neighboring gene pseudouridine 5'-phosphatase Neighboring gene neuroligin 4 X-linked

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044278.2 Reference bStrHab1.2.pri

    Range
    50604417..50623492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030476728.1 → XP_030332588.1  patatin-like phospholipase domain-containing protein 4 isoform X3

    Conserved Domains (1) summary
    cl11396
    Location:102 → 307
    Patatin_and_cPLA2; Patatins and Phospholipases

  2. XM_030476725.1 → XP_030332585.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    Conserved Domains (1) summary
    cd07222
    Location:102 → 347
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  3. XM_030476726.1 → XP_030332586.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    Conserved Domains (1) summary
    cd07222
    Location:102 → 347
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  4. XM_030476727.1 → XP_030332587.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    Conserved Domains (1) summary
    cd07222
    Location:102 → 329
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  5. XM_030476731.1 → XP_030332591.1  patatin-like phospholipase domain-containing protein 4 isoform X4

    Conserved Domains (1) summary
    cl11396
    Location:3 → 191
    Patatin_and_cPLA2; Patatins and Phospholipases

  6. XM_030476732.1 → XP_030332592.1  patatin-like phospholipase domain-containing protein 4 isoform X5

    Conserved Domains (1) summary
    cl11396
    Location:1 → 163
    Patatin_and_cPLA2; Patatins and Phospholipases

RNA

  1. XR_003990109.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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