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PCCA propionyl-CoA carboxylase subunit alpha [ Strigops habroptila (Kakapo) ]

Gene ID: 115603928, updated on 3-Aug-2024

Summary

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Gene symbol
PCCA
Gene description
propionyl-CoA carboxylase subunit alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See PCCA in Genome Data Viewer
Location:
chromosome: 2
Exon count:
28
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 2 NC_044278.2 (69246887..69524455, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 2 NC_044278.1 (50365566..50643134, complement)

Chromosome 2 - NC_044278.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115603866 Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene gamma-glutamylamine cyclotransferase Neighboring gene Zic family member 2 Neighboring gene Zic family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables propionyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
propionyl-CoA carboxylase alpha chain, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044278.2 Reference bStrHab1.2.pri

    Range
    69246887..69524455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030476424.1 → XP_030332284.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A672U1S8
    Conserved Domains (1) summary
    COG4770
    Location:49 → 714
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]

  2. XM_030476421.1 → XP_030332281.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

    Conserved Domains (1) summary
    cl39082
    Location:22 → 593
    PycA; Pyruvate carboxylase [Energy production and conversion]

  3. XM_030476422.1 → XP_030332282.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X2

    Conserved Domains (1) summary
    cl39082
    Location:1 → 555
    PycA; Pyruvate carboxylase [Energy production and conversion]

  4. XM_030476423.1 → XP_030332283.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X2

    Conserved Domains (1) summary
    cl39082
    Location:1 → 555
    PycA; Pyruvate carboxylase [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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