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PCYT1B phosphate cytidylyltransferase 1B, choline [ Strigops habroptila (Kakapo) ]

Gene ID: 115602854, updated on 3-Aug-2024

Summary

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Gene symbol
PCYT1B
Gene description
phosphate cytidylyltransferase 1B, choline
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See PCYT1B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 2 NC_044278.2 (42058258..42092632)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 2 NC_044278.1 (23176937..23211311)

Chromosome 2 - NC_044278.2Genomic Context describing neighboring genes Neighboring gene aristaless related homeobox Neighboring gene DNA polymerase alpha 1, catalytic subunit Neighboring gene small Cajal body-specific RNA 24 Neighboring gene uncharacterized LOC115602879 Neighboring gene pyruvate dehydrogenase kinase 3 Neighboring gene uncharacterized LOC115602888

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase B
Names
phosphate cytidylyltransferase 1, choline, beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044278.2 Reference bStrHab1.2.pri

    Range
    42058258..42092632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030474288.1 → XP_030330148.1  choline-phosphate cytidylyltransferase B isoform X1

    UniProtKB/TrEMBL
    A0A672V133
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 325
    PLN02413; choline-phosphate cytidylyltransferase

  2. XM_030474296.1 → XP_030330156.1  choline-phosphate cytidylyltransferase B isoform X2

    Conserved Domains (1) summary
    PLN02413
    Location:72 → 293
    PLN02413; choline-phosphate cytidylyltransferase

  3. XM_030474303.1 → XP_030330163.1  choline-phosphate cytidylyltransferase B isoform X3

    Conserved Domains (1) summary
    PLN02413
    Location:39 → 292
    PLN02413; choline-phosphate cytidylyltransferase

  4. XM_030474313.1 → XP_030330173.1  choline-phosphate cytidylyltransferase B isoform X4

    Conserved Domains (1) summary
    PLN02413
    Location:37 → 290
    PLN02413; choline-phosphate cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

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