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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Strigops habroptila (Kakapo) ]

Gene ID: 115602629, updated on 3-Aug-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
15
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 22 NC_044298.2 (2521853..2542979)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 14 Unlocalized Scaffold NW_022045575.1 (2521853..2542979)

Chromosome 22 - NC_044298.2Genomic Context describing neighboring genes Neighboring gene natural killer cell receptor 2B4-like Neighboring gene uncharacterized LOC115602691 Neighboring gene SLAM family member 8-like Neighboring gene ETS variant transcription factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044298.2 Reference bStrHab1.2.pri

    Range
    2521853..2542979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030473939.1 → XP_030329799.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A672TZ20
    Conserved Domains (4) summary
    cd05898
    Location:393 → 490
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00409
    Location:29 → 118
    IG; Immunoglobulin
    pfam13927
    Location:310 → 375
    Ig_3; Immunoglobulin domain
    cl11960
    Location:140 → 221
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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