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PGAP2 post-GPI attachment to proteins 2 [ Strigops habroptila (Kakapo) ]

Gene ID: 115602231, updated on 3-Aug-2024

Summary

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Gene symbol
PGAP2
Gene description
post-GPI attachment to proteins 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See PGAP2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 2 NC_044278.2 (122521910..122539996)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 2 NC_044278.1 (103640589..103658675)

Chromosome 2 - NC_044278.2Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 10 subunit Neighboring gene nucleoporin 98 and 96 precursor Neighboring gene ras homolog family member G Neighboring gene stromal interaction molecule 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
post-GPI attachment to proteins factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044278.2 Reference bStrHab1.2.pri

    Range
    122521910..122539996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030473180.1 → XP_030329040.1  post-GPI attachment to proteins factor 2 isoform X5

    UniProtKB/TrEMBL
    A0A672V0K8
    Conserved Domains (1) summary
    pfam10277
    Location:18 → 237
    Frag1; Frag1/DRAM/Sfk1 family

  2. XM_030473158.1 → XP_030329018.1  post-GPI attachment to proteins factor 2 isoform X4

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 139
    Frag1; Frag1/DRAM/Sfk1 family

  3. XM_030473169.1 → XP_030329029.1  post-GPI attachment to proteins factor 2 isoform X4

    Conserved Domains (1) summary
    pfam10277
    Location:18 → 139
    Frag1; Frag1/DRAM/Sfk1 family

  4. XM_030473142.2 → XP_030329002.1  post-GPI attachment to proteins factor 2 isoform X2

    UniProtKB/TrEMBL
    A0A672V0K8
    Conserved Domains (1) summary
    pfam10277
    Location:55 → 278
    Frag1; Frag1/DRAM/Sfk1 family

  5. XM_030473133.1 → XP_030328993.1  post-GPI attachment to proteins factor 2 isoform X1

    Conserved Domains (1) summary
    pfam10277
    Location:55 → 176
    Frag1; Frag1/DRAM/Sfk1 family

  6. XM_030473149.1 → XP_030329009.1  post-GPI attachment to proteins factor 2 isoform X3

    UniProtKB/TrEMBL
    A0A672V0K8
    Conserved Domains (1) summary
    pfam10277
    Location:55 → 274
    Frag1; Frag1/DRAM/Sfk1 family
Nucleotide Protein
Heading Accession and Version

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