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MDH2 malate dehydrogenase 2 [ Strigops habroptila (Kakapo) ]

Gene ID: 115601841, updated on 3-Aug-2024

Summary

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Gene symbol
MDH2
Gene description
malate dehydrogenase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See MDH2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) 13 Unlocalized Scaffold NW_022651054.1 (2461517..2469723, complement)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 12 Unlocalized Scaffold NW_022045573.1 (1720840..1729046, complement)

NW_022651054.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family B (small) member 1 Neighboring gene serine/arginine repetitive matrix 3 Neighboring gene serine/threonine/tyrosine interacting like 1 Neighboring gene transmembrane protein 120A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-malate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NW_022651054.1 Reference bStrHab1.2.pri

    Range
    2461517..2469723 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030472282.1 → XP_030328142.1  malate dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A672TFN1
    Conserved Domains (1) summary
    cd01337
    Location:28 → 336
    MDH_glyoxysomal_mitochondrial; Glyoxysomal and mitochondrial malate dehydrogenases
Nucleotide Protein
Heading Accession and Version

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