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AMACR alpha-methylacyl-CoA racemase [ Strigops habroptila (Kakapo) ]

Gene ID: 115600905, updated on 3-Aug-2024

Summary

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Gene symbol
AMACR
Gene description
alpha-methylacyl-CoA racemase
Gene type
protein coding
RefSeq status
MODEL
Organism
Strigops habroptila
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Orthologs
human mouse all
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Genomic context

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See AMACR in Genome Data Viewer
Location:
chromosome: Z
Exon count:
5
Annotation release Status Assembly Chr Location
101 current bStrHab1.2.pri (GCF_004027225.2) Z NC_044302.2 (89560742..89580926)
100 previous assembly bStrHab1_v1.p (GCF_004027225.1) Z NC_044302.1 (89560742..89580926)

Chromosome Z - NC_044302.2Genomic Context describing neighboring genes Neighboring gene retinoic acid induced 14 Neighboring gene C1q and TNF related 3 Neighboring gene solute carrier family 45 member 2 Neighboring gene relaxin family peptide receptor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-methylacyl-CoA racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-methylacyl-CoA racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrHab1.2.pri

Genomic

  1. NC_044302.2 Reference bStrHab1.2.pri

    Range
    89560742..89580926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030470360.1 → XP_030326220.1  alpha-methylacyl-CoA racemase

    UniProtKB/TrEMBL
    A0A672TU28
    Conserved Domains (1) summary
    COG1804
    Location:3 → 374
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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