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spp1 secreted phosphoprotein 1 [ Sparus aurata (gilthead seabream) ]

Gene ID: 115592235, updated on 12-Sep-2024

Summary

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Gene symbol
spp1
Gene description
secreted phosphoprotein 1
See related
Ensembl:ENSSAUG00010017675
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Orthologs
human zebrafish all
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Genomic context

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See spp1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 12 NC_044198.1 (5673889..5681530)

Chromosome 12 - NC_044198.1Genomic Context describing neighboring genes Neighboring gene very low density lipoprotein receptor Neighboring gene SH3-domain binding protein 2 Neighboring gene G8 domain-containing protein DDB_G0286311-like Neighboring gene prostate androgen-regulated mucin-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044198.1 Chromosome 12 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of an osteopontin-like protein in fish associated with mineral formation. Fonseca VG, et al. FEBS J, 2007 Sep. PMID 17680811

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dentin sialophosphoprotein-like
Names
osteopontin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044198.1 Reference fSpaAur1.1 Primary Assembly

    Range
    5673889..5681530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030434792.1 → XP_030290652.1  dentin sialophosphoprotein-like isoform X1

    UniProtKB/TrEMBL
    A7XCB5

  2. XM_030434794.1 → XP_030290654.1  dentin sialophosphoprotein-like isoform X3

    UniProtKB/TrEMBL
    A0A671WTJ8, A7XCB5
    Related
    ENSSAUP00010042029.1, ENSSAUT00010044248.1

  3. XM_030434793.1 → XP_030290653.1  dentin sialophosphoprotein-like isoform X2

    UniProtKB/TrEMBL
    A7XCB5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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