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guk1b guanylate kinase 1b [ Gadus morhua (Atlantic cod) ]

Gene ID: 115556285, updated on 17-Mar-2024

Summary

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Gene symbol
guk1b
Gene description
guanylate kinase 1b
See related
Ensembl:ENSGMOG00000007582
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
zebrafish all
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Genomic context

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See guk1b in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 12 NC_044059.1 (6438992..6446133, complement)

Chromosome 12 - NC_044059.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene E3 ubiquitin-protein ligase RNF220-like Neighboring gene DNA methyltransferase 1 associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044059.1 Chromosome 12 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanylate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine nucleotide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanylate kinase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044059.1 Reference gadMor3.0 Primary Assembly

    Range
    6438992..6446133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030373458.1 → XP_030229318.1  guanylate kinase-like isoform X1

    UniProtKB/TrEMBL
    A0A8C5AHS9
    Related
    ENSGMOP00000032482.1, ENSGMOT00000044633.1
    Conserved Domains (1) summary
    TIGR03263
    Location:5 → 228
    guanyl_kin; guanylate kinase

  2. XM_030373459.1 → XP_030229319.1  guanylate kinase-like isoform X1

    UniProtKB/TrEMBL
    A0A8C5AHS9
    Conserved Domains (1) summary
    TIGR03263
    Location:5 → 228
    guanyl_kin; guanylate kinase

  3. XM_030373460.1 → XP_030229320.1  guanylate kinase-like isoform X2

    UniProtKB/TrEMBL
    A0A8C4ZAA1, A0A8C5AIF2
    Related
    ENSGMOP00000008112.2, ENSGMOT00000008345.2
    Conserved Domains (1) summary
    TIGR03263
    Location:5 → 187
    guanyl_kin; guanylate kinase

  4. XM_030373461.1 → XP_030229321.1  guanylate kinase-like isoform X2

    UniProtKB/TrEMBL
    A0A8C4ZAA1, A0A8C5AIF2
    Conserved Domains (1) summary
    TIGR03263
    Location:5 → 187
    guanyl_kin; guanylate kinase
Nucleotide Protein
Heading Accession and Version

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