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tstd3 thiosulfate sulfurtransferase like domain containing 3 [ Gadus morhua (Atlantic cod) ]

Gene ID: 115554498, updated on 12-Sep-2024

Summary

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Gene symbol
tstd3
Gene description
thiosulfate sulfurtransferase like domain containing 3
See related
Ensembl:ENSGMOG00000006097
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
human zebrafish all
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Genomic context

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See tstd3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 11 NC_044058.1 (15351133..15353361)

Chromosome 11 - NC_044058.1Genomic Context describing neighboring genes Neighboring gene PNN-interacting serine/arginine-rich protein Neighboring gene ubiquitin specific peptidase 45 Neighboring gene Filament_head and Filament domain-containing protein Neighboring gene PR domain containing 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044058.1 Chromosome 11 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiosulfate sulfurtransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044058.1 Reference gadMor3.0 Primary Assembly

    Range
    15351133..15353361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030371267.1 → XP_030227127.1  thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3

    UniProtKB/TrEMBL
    A0A8C5AJS3
    Related
    ENSGMOP00000033085.1, ENSGMOT00000064802.1
    Conserved Domains (1) summary
    cl00125
    Location:65 → 170
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
Nucleotide Protein
Heading Accession and Version

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