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acsl5 acyl-CoA synthetase long chain family member 5 [ Gadus morhua (Atlantic cod) ]

Gene ID: 115531619, updated on 17-Mar-2024

Summary

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Gene symbol
acsl5
Gene description
acyl-CoA synthetase long chain family member 5
See related
Ensembl:ENSGMOG00000018683
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
human zebrafish all
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Genomic context

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See acsl5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
21
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 18 NC_044065.1 (513773..520954)

Chromosome 18 - NC_044065.1Genomic Context describing neighboring genes Neighboring gene dickkopf-related protein 3-like Neighboring gene tectorin beta Neighboring gene guanylate cyclase 2g Neighboring gene ankyrin-3-like Neighboring gene glucose-6-phosphatase catalytic subunit 1a, tandem duplicate 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044065.1 Chromosome 18 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Atlantic cod reveals a unique immune system. Star B, et al. Nature, 2011 Aug 10. PMID 21832995, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044065.1 Reference gadMor3.0 Primary Assembly

    Range
    513773..520954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030340971.1 → XP_030196831.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZU35
    Conserved Domains (1) summary
    cd05927
    Location:156 → 733
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_030340973.1 → XP_030196833.1  long-chain-fatty-acid--CoA ligase 5 isoform X2

    UniProtKB/TrEMBL
    A0A8C5C440
    Related
    ENSGMOP00000038748.1, ENSGMOT00000027473.1
    Conserved Domains (1) summary
    cd05927
    Location:103 → 680
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
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