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EXOG exo/endonuclease G [ Lynx canadensis (Canada lynx) ]

Gene ID: 115523274, updated on 13-Aug-2024

Summary

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Gene symbol
EXOG
Gene description
exo/endonuclease G
See related
Ensembl:ENSLCNG00005009691
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See EXOG in Genome Data Viewer
Location:
chromosome: C2
Exon count:
8
Annotation release Status Assembly Chr Location
102 current mLynCan4.pri.v2 (GCF_007474595.2) C2 NC_044311.2 (6448780..6492235)
101 previous assembly mLynCan4_v1.p (GCF_007474595.1) C2 NC_044311.1 (6448780..6492235)

Chromosome C2 - NC_044311.2Genomic Context describing neighboring genes Neighboring gene xylulokinase Neighboring gene activin A receptor type 2B Neighboring gene sodium voltage-gated channel alpha subunit 5 Neighboring gene disabled homolog 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA endodeoxyribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic DNA fragmentation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclease EXOG, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lynx canadensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynCan4.pri.v2

Genomic

  1. NC_044311.2 Reference mLynCan4.pri.v2

    Range
    6448780..6492235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030329124.1 → XP_030184984.1  nuclease EXOG, mitochondrial

    UniProtKB/TrEMBL
    A0A667GMM5, A0A667H2U8
    Conserved Domains (2) summary
    smart00477
    Location:77 → 286
    NUC; DNA/RNA non-specific endonuclease
    pfam18026
    Location:302 → 347
    Exog_C; Endo/exonuclease (EXOG) C-terminal domain

  2. XM_030329123.1 → XP_030184983.1  nuclease EXOG, mitochondrial

    UniProtKB/TrEMBL
    A0A667GMM5, A0A667H2U8
    Conserved Domains (2) summary
    smart00477
    Location:77 → 286
    NUC; DNA/RNA non-specific endonuclease
    pfam18026
    Location:302 → 347
    Exog_C; Endo/exonuclease (EXOG) C-terminal domain

  3. XM_030329122.1 → XP_030184982.1  nuclease EXOG, mitochondrial

    UniProtKB/TrEMBL
    A0A667GMM5, A0A667H2U8
    Related
    ENSLCNP00005014793.1, ENSLCNT00005016538.1
    Conserved Domains (2) summary
    smart00477
    Location:77 → 286
    NUC; DNA/RNA non-specific endonuclease
    pfam18026
    Location:302 → 347
    Exog_C; Endo/exonuclease (EXOG) C-terminal domain
Nucleotide Protein
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