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Adra1d adrenergic receptor, alpha 1d [ Mus musculus (house mouse) ]

Gene ID: 11550, updated on 2-Nov-2024

Summary

Official Symbol
Adra1dprovided by MGI
Official Full Name
adrenergic receptor, alpha 1dprovided by MGI
Primary source
MGI:MGI:106673
See related
Ensembl:ENSMUSG00000027335 AllianceGenome:MGI:106673
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Spr8; Adra1; Gpcr8; [a]1d; Adra-1; Adra1a; alpha1D-AR
Summary
Enables alpha1-adrenergic receptor activity. Involved in neuron-glial cell signaling and regulation of blood pressure. Acts upstream of or within negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure and norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure. Predicted to be active in plasma membrane. Is expressed in brain; diencephalon; and forebrain. Orthologous to human ADRA1D (adrenoceptor alpha 1D). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in adrenal adult (RPKM 24.0), cortex adult (RPKM 9.4) and 10 other tissues See more
Orthologs
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Genomic context

See Adra1d in Genome Data Viewer
Location:
2 F1; 2 63.5 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (131387277..131404417, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (131545357..131562497, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 30679 Neighboring gene STARR-seq mESC enhancer starr_05713 Neighboring gene spermine oxidase Neighboring gene predicted gene, 30732 Neighboring gene predicted gene, 39938 Neighboring gene predicted gene 14285 Neighboring gene STARR-seq mESC enhancer starr_05714 Neighboring gene predicted gene 14280 Neighboring gene predicted gene, 30986

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (5) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables alpha1-adrenergic receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables alpha1-adrenergic receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables alpha1-adrenergic receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adrenergic receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in cell-cell signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron-glial cell signaling IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of MAPK cascade IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of cytosolic calcium ion concentration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of vasoconstriction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of vasoconstriction ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of blood pressure IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
alpha-1D adrenergic receptor
Names
alpha-1A adrenergic receptor
alpha-1D adrenoceptor
alpha-1D adrenoreceptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013460.5NP_038488.4  alpha-1D adrenergic receptor

    See identical proteins and their annotated locations for NP_038488.4

    Status: VALIDATED

    Source sequence(s)
    AL831731
    Consensus CDS
    CCDS16764.1
    UniProtKB/Swiss-Prot
    P97714, Q61619
    UniProtKB/TrEMBL
    A2ANQ2
    Related
    ENSMUSP00000099473.4, ENSMUST00000103184.4
    Conserved Domains (2) summary
    cd14964
    Location:93117
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:91407
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    131387277..131404417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)