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LMAN2L lectin, mannose binding 2 like [ Taeniopygia guttata (zebra finch) ]

Gene ID: 115498150, updated on 13-Aug-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
See related
Ensembl:ENSTGUG00000020822 Ensembl:ENSTGUG00000027761
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 22
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 22 NC_044234.2 (3676134..3682555)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 22 NC_045020.1 (3711599..3719589)

Chromosome 22 - NC_044234.2Genomic Context describing neighboring genes Neighboring gene semaphorin 4C Neighboring gene ankyrin repeat domain 39 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene uncharacterized LOC121471014

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044234.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    3676134..3682555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030289882.3 → XP_030145742.3  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A674HK27
    Conserved Domains (1) summary
    cd06901
    Location:31 → 289
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  2. XM_041720548.1 → XP_041576482.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A674HK27
    Conserved Domains (1) summary
    cd06901
    Location:31 → 278
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  3. XM_030289884.3 → XP_030145744.3  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A674HK27
    Conserved Domains (1) summary
    cd06901
    Location:31 → 278
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain
Nucleotide Protein
Heading Accession and Version

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