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CLEC14A C-type lectin domain containing 14A [ Taeniopygia guttata (zebra finch) ]

Gene ID: 115495556, updated on 13-Aug-2024

Summary

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Gene symbol
CLEC14A
Gene description
C-type lectin domain containing 14A
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See CLEC14A in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 5 NC_044217.2 (38188342..38190538, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 5 NC_045004.1 (38317066..38323517, complement)

Chromosome 5 - NC_044217.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115495555 Neighboring gene uncharacterized LOC121470111 Neighboring gene somatostatin receptor 1 Neighboring gene uncharacterized LOC115495557 Neighboring gene translation initiation factor IF-2-like Neighboring gene SEC23 homolog A, COPII coat complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 14 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044217.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    38188342..38190538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041716774.1 → XP_041572708.1  C-type lectin domain family 14 member A

    Conserved Domains (1) summary
    cl02432
    Location:92 → 233
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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