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SLC35C1 solute carrier family 35 member C1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 115495501, updated on 13-Aug-2024

Summary

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Gene symbol
SLC35C1
Gene description
solute carrier family 35 member C1
See related
Ensembl:ENSTGUG00000010741
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 5 NC_044217.2 (23914481..23917816, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 5 NC_045004.1 (24087101..24091001, complement)

Chromosome 5 - NC_044217.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115495500 Neighboring gene mitogen-activated protein kinase 8 interacting protein 1 Neighboring gene peroxisomal biogenesis factor 16 Neighboring gene Frey regulator of sperm-oocyte fusion 1 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene transmembrane protein 263 Neighboring gene carbohydrate sulfotransferase 1 Neighboring gene uncharacterized LOC121470074

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044217.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    23914481..23917816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030274300.3 → XP_030130160.1  GDP-fucose transporter 1

    UniProtKB/TrEMBL
    H0ZKF1
    Related
    ENSTGUP00000011071.2
    Conserved Domains (1) summary
    cl26744
    Location:42 → 340
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
Heading Accession and Version

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