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PRKCSH PRKCSH beta subunit of glucosidase II [ Taeniopygia guttata (zebra finch) ]

Gene ID: 115491602, updated on 13-Aug-2024

Summary

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Gene symbol
PRKCSH
Gene description
PRKCSH beta subunit of glucosidase II
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See PRKCSH in Genome Data Viewer
Location:
chromosome: 30
Exon count:
23
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 30 NC_044243.2 (626314..682444, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) Unplaced Scaffold NW_022611549.1 (191865..196365, complement)

Chromosome 30 - NC_044243.2Genomic Context describing neighboring genes Neighboring gene 6-phosphogluconolactonase Neighboring gene collagen beta(1-O)galactosyltransferase 1 Neighboring gene uncharacterized LOC121468280 Neighboring gene uncharacterized LOC121468279 Neighboring gene uncharacterized LOC121468278 Neighboring gene phospholipid phosphatase-related protein type 2-like Neighboring gene crumbs cell polarity complex component 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosidase 2 subunit beta
Names
protein kinase C substrate 80K-H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044243.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    626314..682444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041711665.1 → XP_041567599.1  glucosidase 2 subunit beta

    Conserved Domains (1) summary
    pfam12999
    Location:392 → 543
    PRKCSH-like; Glucosidase II beta subunit-like
Nucleotide Protein
Heading Accession and Version

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